MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Parabacteroides goldsteinii
19428wG3_P14
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 123
bases: 6,785,295 bps
CDS: 5,304
rRNA: 13
tRNA: 69
tmRNA: 1
Total number of protein coding genes annotated/found:
5,206
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5019|JADGKT010000001.1
MBF0762922.1
Genome Viewer
NA
AA
1728/576
19205-17478
trypsin-like peptidase domain-containing protein
SEQF5019|JADGKT010000001.1
MBF0762923.1
Genome Viewer
NA
AA
1569/523
19538-21106
ATP-binding protein
SEQF5019|JADGKT010000001.1
MBF0762924.1
Genome Viewer
NA
AA
1185/395
22319-21135
ABC transporter permease
SEQF5019|JADGKT010000001.1
MBF0762925.1
Genome Viewer
NA
AA
1185/395
23487-22303
ABC transporter permease
SEQF5019|JADGKT010000001.1
MBF0762926.1
Genome Viewer
NA
AA
993/331
24492-23500
biotin/lipoyl-binding protein
SEQF5019|JADGKT010000001.1
MBF0762927.1
Genome Viewer
NA
AA
1434/478
25971-24538
TolC family protein
SEQF5019|JADGKT010000001.1
MBF0762928.1
Genome Viewer
NA
AA
1218/406
27263-26046
MFS transporter
SEQF5019|JADGKT010000001.1
MBF0762929.1
Genome Viewer
NA
AA
543/181
28273-27731
FHA domain-containing protein
SEQF5019|JADGKT010000001.1
MBF0762930.1
Genome Viewer
NA
AA
696/232
29317-28622
Ig-like domain-containing protein
SEQF5019|JADGKT010000001.1
MBF0762931.1
Genome Viewer
NA
AA
843/281
30182-29340
hypothetical protein
SEQF5019|JADGKT010000001.1
MBF0762932.1
Genome Viewer
NA
AA
783/261
30966-30184
hypothetical protein
SEQF5019|JADGKT010000001.1
MBF0762933.1
Genome Viewer
NA
AA
459/153
32435-31977
HU family DNA-binding protein
SEQF5019|JADGKT010000001.1
MBF0762934.1
Genome Viewer
NA
AA
876/292
34106-33231
NAD kinase
SEQF5019|JADGKT010000001.1
MBF0762935.1
Genome Viewer
NA
AA
660/220
34779-34120
CBS domain-containing protein
SEQF5019|JADGKT010000001.1
MBF0762936.1
Genome Viewer
NA
AA
720/240
34865-35584
pyridoxine 5'-phosphate synthase
SEQF5019|JADGKT010000001.1
MBF0762937.1
Genome Viewer
NA
AA
711/237
35618-36328
MotA/TolQ/ExbB proton channel family protein
SEQF5019|JADGKT010000001.1
MBF0762938.1
Genome Viewer
NA
AA
411/137
36337-36747
biopolymer transporter ExbD
SEQF5019|JADGKT010000001.1
MBF0762939.1
Genome Viewer
NA
AA
837/279
36753-37589
energy transducer TonB
SEQF5019|JADGKT010000001.1
MBF0762940.1
Genome Viewer
NA
AA
546/182
37600-38145
DJ-1/PfpI family protein
SEQF5019|JADGKT010000001.1
MBF0762941.1
Genome Viewer
NA
AA
915/305
38238-39152
DMT family transporter
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Items 21 - 40
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* Click GI,UID,Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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